The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.
The unique characteristics of the Insight Journal include:
- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews
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- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews
Subscribe to the Kitware's newsletter
to receive news about open-source on your desk, it's free!
This document describes the implementation of an ITK class to support the reading and writing of Meshes in STL file format. The Meshes are assumed to contain 2D manifolds embedded in a 3D space. In practice, it would be desirable to use this class mostly to [...]
BinShrink: A multi-resolution filter with cache efficient averaging.
Published in The Insight Journal
Published in The Insight Journal
We present a new filter for the Insight Toolkit (ITK) for reducing the resolution of an image by an integer factor while averaging called BinShrink. This filter provides a new level of performance to ITK for reducing resolution and noise present in an image. [...]
This document describes the Image-based Vascular Analysis Toolkit (IvanTk), a set of cross-platform C++ open source software libraries for the detection, extraction and modeling of vessels in 2D/3D medical images based on the Insight Toolkit. We provide an [...]
GPU and CPU implementation of Young - Van Vliet's Recursive Gaussian Smoothing Filter
Published in The Insight Journal
Published in The Insight Journal
This document describes an implementation for GPU and CPU of Young and Van Vliet's recursive Gaussian smoothing as an external module for the Insight Toolkit ITK, version 4.* www.itk.org. In the absence of an OpenCL-capable platform, the code will run the CPU [...]
Deforming a 3D surface mesh while preserving its local detail is useful for editing anatomical atlases or for mesh based segmentation. This contribution introduces new classes for performing hard and soft constraints deformation in a flexible design which [...]
This paper presents code for reading contours from DICOM RT structure set files into binary labels. This is a common requirement for transferring expert manual segmentations from radiotherapy treatment planning software into external image analysis [...]
It is sometimes useful to be able to apply binary morphological operations, such as erosions and dilations, to labelled images in a fashion that preserves the labels. This article introduces a specialised class implementing parallel methods described in beare [...]
This document describes an ITK implementation of an interactive method for tracing curvilinear structures.
The basic tools provided in this framework are an oriented flux-based tubularity measure and a geodesic path
tracer that uses the fast marching [...]
Nonrigid image registration is an important, but resource demanding and time-consuming task in medical image analysis. This limits its application in time-critical clinical routines. In this report we explore acceleration of two time-consuming parts of a [...]
Primal/Dual Mesh with Application to Triangular/Simplex Mesh and Delaunay/Voronoi
Published in The Insight Journal
Published in The Insight Journal
This document describes an extension of ITK to handle both primal and dual meshes simultaneously. This paper describe in particular the data structure, an extension of itk::QuadEdgeMesh, a filter to compute and add to the the structure the dual of an existing [...]
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Publication of the Month
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| A Skull-Stripping Filter for ITK
by Bauer S., Fejes T., Reyes M.
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Issues Accepting Submissions
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| 2018 January-December 12 days |
| Computational Algorithms 559 days |
| Medical Imaging and Computing 3894 days |
| Ongoing Submissions 5491 days |
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Most Recent Reviews
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| Worked very well and was easy to build A Skull-Stripping Filter for ITK by Jared Becksfort on 2017-09-19 16:03:36
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| Very interesting work Isotropic and Steerable Wavelets in N... by Le Zheng on 2017-06-02 11:07:04
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| Valuable contribution A new implementation of... by Dženan Zukić on 2016-07-28 15:40:50
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| Simple interface A Skull-Stripping Filter for ITK by Todd Jensen on 2016-05-30 08:00:15
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| A useful function, but with some build... Walk In A Triangulation : Straight Walk by Davis Vigneault on 2015-06-09 09:57:49
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| A meaningful contribution with... Exact Geometrical Predicate: Point in... by Davis Vigneault on 2015-06-09 11:10:14
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| Useful tool for kinetic analysis of PET... InsightToolkit Kinetic Analysis... by Matthew Mccormick on 2014-11-21 18:34:13
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