MIDAS Journal

The MIDAS Journal is an Open Access on-line publication covering different domains from Visualization to Image processing.

The unique characteristics of the MIDAS Journal include:

-Open-access to articles and reviews
-Open peer-review that invites discussion between reviewers and authors
-Support for continuous revision of articles, code, and reviews

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Anomalous Diffusion Paradigm for Image Denoising Process
Published in The Insight Journal

Senra Filho A.C., Murta Junior L.O.

Anisotropic and isotropic diffusion equations have been extensively applied on biomedical image processing for many years and a great diversity of algorithm have been proposed by the scientific community. Here, it is available a recent new implementation of [...]

downloaded 2747 times, viewed 11185 times and no review.

Two Luis Miguel fans walk into a bar in Nagoya ---> (yada, yada, yada) ---> an ITK-implementation of a popular patch-based denoising filter
Published in The Insight Journal

Tustison N., Manjon J.V.

This document describes an ITK implementation of the adaptive patch-based image denoising algorithm described in cite{Manjon:2010aa}. This offering consists of the templated class itkPatchBasedDenoisingImageFilter interfaced through the DenoiseImage program [...]

downloaded 3095 times, viewed 13257 times and no review.

ND morphological contour interpolation
Published in The Insight Journal

Zukić D., Vicory J., McCormick M., Wisse L., Gerig G., Yushkevich P., Aylward S.

This document describes a new class, itk::MorphologicalContourInterpolator, which implements a method proposed by Albu et al. in 2008. Interpolation is done by first determining correspondence between shapes on adjacent segmented slices by detecting overlaps, [...]

downloaded 3105 times, viewed 14095 times and no review.

RLEImage: run-length encoded memory compression scheme for an itk::Image
Published in The Insight Journal

Zukić D., McCormick M., Gerig G., Yushkevich P.

This document describes a new class, itk::RLEImage, which uses run-length encoding to reduce the memory needed for storage of label maps. This class is accompanied by all the iterators to make it a dropin replacement for itk::Image. By changing the image [...]

downloaded 2410 times, viewed 9573 times and no review.

Cubic and Hermite splines for VTK
Published in The MIDAS Journal

Kovacs N., Peters T., Chen E.

A cubic spline is a spline where each curve is defined by a third-order polynomial, while a Hermite spline has each polynomial specified in Hermite form, being computed using tangent information as well as the position of the points. We propose two new [...]

downloaded 1359 times, viewed 10635 times and no review.

A new implementation of itk::ImageToImageFilter for efficient parallelization of image processing algorithms using Intel Threading Building Blocks

A new implementation of itk::ImageToImageFilter for efficient parallelization of image processing algorithms using Intel Threading Building Blocks
Published in The Insight Journal

Jaberzadeh A., Scherrer B., Warfield S.

Modern medical imaging makes use of high performance computing to accelerate image acquisition, image reconstruction, image visualization and image analysis. Software libraries that provide implementations of key medical imaging algorithms need to efficiently [...]

downloaded 2979 times, viewed 22497 times and 1 reviews.

Providing values of adjacent voxel with vtkDiscreteMarchingCubes
Published in The VTK Journal

Grothausmann R.

The contribution to VTK presented in this article is an extension to vtk::vtkDiscreteMarchingCubes to also create vtk::vtkPointData scalars containing the value of the adjacent voxel. These can be used to remove regions of the marching-cubes 1 mesh depending [...]

downloaded 2100 times, viewed 9298 times and no review.

Isotropic and Steerable Wavelets in N Dimensions. A multiresolution analysis framework.

Isotropic and Steerable Wavelets in N Dimensions. A multiresolution analysis framework.
Published in The Insight Journal

Hernandez-Cerdan P.

This document describes the implementation of the external module ITKIsotropicWavelets, a multiresolution (MRA) analysis framework using isotropic and steerable wavelets in the frequency domain. This framework provides the backbone for state of the art [...]

downloaded 2142 times, viewed 12406 times and 1 reviews.

Performance Benchmarking the Insight Toolkit
Published in The Insight Journal

McCormick M., Kang H.J., Barre S.

This document describes a module for the Insight Toolkit (ITK) to assist in performance benchmarking and a suite of benchmarks for the toolkit. These resources provide metrics to quantify software computational performance. This is a pre-requisite to improve [...]

downloaded 3009 times, viewed 10051 times and no review.

Automatic Mandible Segmentation on CT Images Using Prior Anatomical Knowledge
Published in The MIDAS Journal

Aghdasi N., Li Y., Berens A., Moe K., Hannaford B.

We present a fully automatic method for segmenting mandible in CT images using anatomic landmarks and prior knowledge. The aim is to utilize spatial relationship of anatomic landmarks with image processing techniques to detect mandible robustly and [...]

downloaded 1426 times, viewed 15832 times and no review.

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